Glossary
BACTERIA IDENTIFIED FROM ENVIRONMENTAL SPECIMENS FUNGI IDENTIFIED FROM ENVIRONMENTAL SPECIMENS
A
- Acidovorax avenae (Pseudomonas avenae)
- Acidovorax delafieldii (Pseudomonas delafieldii)
- Acidovoraxspecies
- Acinetobacter anitratus (Acinetobacter calcoaceticus biotype anitratus)
- Acinetobacter anitratus (Acinetobacter calcoaceticus biotype anitratus)
- Acinetobacter anitratus genospecies 13 (Acinetobacter calcoaceticus biotype anitratus)
- Acinetobacter anitratus genospecies 4 (Acinetobacter calcoaceticus biotype anitratus)
- Acinetobacter calcoaceticus
- Acinetobacter calcoaceticus genospecies 13 (Acinetobacter baumanii)
- Acinetobacter calcoaceticus genospecies 2 (Acinetobacter baumanii)
- Acinetobacter calcoaceticus genospecies 3
- Acinetobacter genospecies 10 (Acinetobacter calcoaceticus biotype lwoffii)
- Acinetobacter genospecies 15
- Acinetobacter johnsonii (Acinetobacter calcoaceticus biotype lwoffii)
- Acinetobacter johnsonii genospecies 7 (Acinetobacter calcoaceticus biotype lwoffii)
- Acinetobacter lwoffii (Acinetobacter calcoaceticus biotype lwoffii)
- Acinetobacter radioresistens
- Acinetobacter radioresistens genospecies 12
- Acinetobacter species
- Aerobic Actinomycetales
- Aeromonas caviae DNA group 4
- Aeromonas hydrophilia DNA group 1
- Aeromonas media DNA group 5B
- Aeromonas media-like, DNA group 5A
- Aeromonas salmonicida
- Aeromonas schubertii DNA Group 12
- Aeromonas species
- Aeromonas veronii / sorbria DNA group 8
- Agrobacterium radiobacter (CDC Group Vd-3)
- Agrobacterium rhizogenes
- Agrobacterium rhizogenes A
- Agrobacterium species
- Agrobacterium tumefaciens
- Agrobacterium tumefaciens A
- Agrobacterium vitis
- Alcaligenes faecalis
- Alcaligenes faecalis sub-species homari
- Alcaligenes latus
- Alcaligenes species
- Alcaligenes xylosoxidans subspecies denitrificans (Achromobacter denitrificans)
- Alcaligenes xylosoxidans subspecies xylosoxidans (Achromobacter xylosoxidans)
- Aquaspirillum peregrinum
- Aquaspirillum species
- Arthrobacter species
- Aureobacterium species
- Aureobacterium terregens
- Aureobacterium testaceum
B
- Bacillus (Paenibacillus) azotoformans
- Bacillus (Paenibacillus) macerans
- Bacillus (Paenibacillus) polymyxa
- Bacillus alcalophilus
- Bacillus amyloliquefaciens
- Bacillus brevis
- Bacillus circulans
- Bacillus coagulans
- Bacillus laevolacticus
- Bacillus lentus
- Bacillus licheniformis
- Bacillus megaterium
- Bacillus mycoides
- Bacillus pasteurii
- Bacillus pumilus
- Bacillus species
- Bacillus sphaericus
- Bacillus subtilis
- Bacillus subtilis variety globigii
- Bacillus thuringiensis
- Brevibacterium acetylicum
- Brevibacterium species
- Brevundimonas diminuta (Pseudomonas diminuta)
- Brevundimonas species (Pseudomonas species)
- Brevundimonas vesicularis (Pseudomonas vesicularis)
- Burkholderia cepacia
- Burkholderia covovenenans
- Burkholderia species
C
- CDC Group B – 1/B – 3
- CDC Group DF – 3
- CDC Group E
- CDC Group E, Subgroup A
- CDC Group EF – 4
- CDC Group EO – 2 (Eugonic Oxidizer – 2)
- CDC Group II – H
- CDC Group IVc – 2
- CDC Groups
- Cellulomonas cartae
- Chryseobacterium indologenes (Flavobacterium indologenes, Flavobacterium Group IIb)
- Chryseobacterium meningosepticum (Flavobacterium meningosepticum)
- Chryseomonas luteola (Group Ve – 1)
- Citrobacter amalonaticus
- Citrobacter freundii
- Citrobacter koserii (Citrobacter diversus)
- Citrobacter species
- Clavibacter michiganense (Clavibacter michiganense subspecies michiganense) (Corynebacterium michiganense)
- Clavibacter sepedonicum (Clavibacter michiganense subspecies sepedonicum) (Corynebacterium sepedonicum)
- Clavibacter species
- Coagulase negative staphylococci
- Comamonas acidovorans (Pseudomonas acidovorans)
- Comamonas species
- Comamonas terrigena (Vibrio neocistes)
- Commonas testosteroni (Pseudomonas testosteroni)
- Corynebacterium afermentans (CDC Group ANF – 1)
- Corynebacterium aquaticum
- Corynebacterium aquaticum A
- Corynebacterium aquaticum B
- Corynebacterium jeikeium
- Corynebacterium jeikeium A
- Corynebacterium jeikeium B
- Corynebacterium pseudodiphtheriticum
- Corynebacterium species
- Curtobacterium albidum
- Curtobacterium citreum
- Curtobacterium flaccumfaciens
- Curtobacterium luteum
- Curtobacterium species
- Cytophaga johnsonae (Flavobacterium pectinovorum)
E
- Enterobacter aerogenes
- Enterobacter agglomerans
- Enterobacter agglomerans biogroup 2A
- Enterobacter agglomerans biogroup 3B
- Enterobacter amnigenus
- Enterobacter asburiae
- Enterobacter cloacae
- Enterobacter gergoviae
- Enterobacter intermedium
- Enterobacter sakazakii
- Enterobacter species
- Enterococcus faecalis
- Escherichia coli
- Ewingella americana
F
G
K
- Kingella kingae
- Klebsiella oxytoca
- Klebsiella ozaenae
- Klebsiella planticola
- Klebsiella pneumoniae
- Klebsiella species
- Klebsiella terrigena
- Kluyvera cryocrescens
- Kocuria kristinae (Micrococcus kristinae)
- Kocuria rosea (Micrococcus roseus)
- Kocuria species
- Kocuria varians (Micrococcus varians)
- Kurthia zopfii
- Kytococcus sedentarius (Micrococcus sedentarius)
M
- Methylobacterium species
- Microbacterium arborescens
- Microbacterium species
- Microbacterium species (CDC Group A – 4)
- Microbacterium species (CDC Group A – 5)
- Micrococcus agilis
- Micrococcus diversus
- Micrococcus luteus
- Micrococcus lylae
- Micrococcus species
- Micromonospora species
- Moraxella species
- Morganella morganii
- Morganella species
- Mycobacterium chelonae
N
O
P
- Pantoea agglomerans (Enterobacter agglomerans)
- Pantoea agglomerans, biogroup 3 (Enterobacter agglomerans)
- Pantoea agglomerans, biogroup 4 (Enterobacter agglomerans)
- Pasteurella anatipestifer
- Proteus mirabilis
- Proteus myxofaciens
- Proteus penneri
- Proteus species
- Proteus vulgaris
- Providencia rettgeri
- Providencia species
- Providencia stuartii
- Pseudomonas aeruginosa
- Pseudomonas alcaligenes
- Pseudomonas alcaligenes biovar A
- Pseudomonas alcaligenes biovar B
- Pseudomonas andropogonis
- Pseudomonas aurantiaca
- Pseudomonas corrugata
- Pseudomonas diminuta
- Pseudomonas fluorescens
- Pseudomonas fluorescens biotype G
- Pseudomonas mendocina
- Pseudomonas pseudoalcaligenes
- Pseudomonas putida
- Pseudomonas putida biotype A
- Pseudomonas putida biotype B
- Pseudomonas species
- Pseudomonas stutzeri
- Pseudomonas vesicularis
- Pseudomonas viridilivida
- Psychrobacter denitrificans (Kingella denitrificans)
- Psychrobacter immobulis (Moraxella-like organisms)
- Psychrobacter phenylpyruvicus
- Psychrobacter species
R
S
- Serratia ficaria
- Serratia liquefaciens
- Serratia marcescens
- Serratia odorifera
- Serratia plymuthica
- Serratia rubidaea
- Serratia species
- Shewanella putrefaciens
- Shewanella putrefaciens A
- Shewanella putrefaciens B
- Shewanella putrefaciens C
- Shewanella putrefaciens D
- Spegazzinia tessarthra
- Sphingobacterium multivorum (Flavobacterium Group IIK-2)
- Sphingobacterium species
- Sphingobacterium spiritovorum (Flavobacterium spiritivorum)
- Sphingobacterium thalpophilum
- Sphingomonas paucimobilis (Xanthomonas Group IIK – 1)
- Sphingomonas paucimobilis A (Xanthomonas Group IIK – 1)
- Sphingomonas paucimobilis B (Xanthomonas Group IIK – 1)
- Staphylococcus aureus
- Staphylococcus auricularis
- Staphylococcus capitis
- Staphylococcus caprae
- Staphylococcus carnosus
- Staphylococcus caseolyticus
- Staphylococcus cohnii
- Staphylococcus cohnii subspecies cohnii
- Staphylococcus cohnii subspecies urealyticum
- Staphylococcus epidermidis
- Staphylococcus gallinarum
- Staphylococcus haemolyticus
- Staphylococcus haemolyticus Group 1
- Staphylococcus haemolyticus Group 2
- Staphylococcus haemolyticus Group 3
- Staphylococcus hominis
- Staphylococcus hominis Group 1
- Staphylococcus hominis Group 2
- Staphylococcus hominis Group 3
- Staphylococcus hyicus
- Staphylococcus hyicus subspecies chromogenes
- Staphylococcus hyicus subspecies hyicus
- Staphylococcus intermedius
- Staphylococcus kloosii
- Staphylococcus kloosii Group A
- Staphylococcus lentus (Staphylococcus sciuri subspecies lentus)
- Staphylococcus lugdunensis
- Staphylococcus saprophyticus
- Staphylococcus scheiferi
- Staphylococcus scheiferi subspecies coagulans
- Staphylococcus scheiferi subspecies schleiferi
- Staphylococcus sciuri (Staphylococcus sciuri subspecies sciuri)
- Staphylococcus species
- Staphylococcus warneri
- Staphylococcus xylosus
- Staphylococcus xylosus Group 1
- Staphylococcus xylosus Group 2
- Stenotrophomonas maltophilia (Xanthomonas maltophilia, Pseudomonas maltophilia)
- Streptomyces albus
- Streptomyces anulatus (Streptomyces griseus)
- Streptomyces coelicolor
- Streptomyces lateritius
- Streptomyces somaliensis
- Streptomyces species
- Suttonella indologenes (Kingella indologenes)
X
- Xanthomonas campestris
- Xanthomonas campestris pathovar vesicatoria A
- Xanthomonas campestris pathovar vesicatoria B
- Xanthomonas oryzae (Xanthomonas campestris pathovar oryzae)
- Xanthomonas oryzae pathovar oryzae B (Xanthomonas campestris pathovar oryzae)
- Xanthomonas oryzae pathovar oryzae E (Xanthomonas campestris pathovar oryzae)
- Xanthomonas species
